PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010844.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 192aa MW: 22413.3 Da PI: 8.4708

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010844.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.7e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W+t a+ g++Rt+k+c++rw++yl Cse_sc010844.1_g040.1 17 KGPWTMEEDLILINYIADHGEGVWNTLAKSAGLKRTGKSCRLRWLNYL 64 79********************************************97 PP
2	Myb_DNA-binding	54.7	2.3e-17	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ ++++++G++ W++Ia++++ gRt++++k++w++ Cse_sc010844.1_g040.1 70 RGNITPEEQLLIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNFWRT 113 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MEKRSIFTSV QDVEIRKGPW TMEEDLILIN YIADHGEGVW NTLAKSAGLK RTGKSCRLRW 60 LNYLRPDVRR GNITPEEQLL IMELHAKWGN RWSKIAKHLP GRTDNEIKNF WRTRIQKQVK 120 RTENFSGQTS SGQNNQVNMI SSQTCNVVNP MEVSYYHPCD NTIAFSSSYA TETNENTWNM 180 EDLWSMQLLQ NE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	9e-81	MYB family protein