PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010872.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 259aa    MW: 29134.9 Da    PI: 5.3337
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010872.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.81.5e-16137232699
                            ..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                     B3   6 tpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgr 87 
                             + ++lk++r+++p+++a +h    +g  +e + l + d++g++W+v+++ + + ++  yv+t G k+F  +++L++gD+v F++  r
  Cse_sc010872.1_g020.1 137 ATDSNLKTCRMRIPRQYAMDHfpkvNG--TEVVPLNIIDTDGKEWSVNFRCWPHYNKatYVMT-GLKDFYVSKNLQTGDTVAFYR--R 219
                            46678899*************995543..455669999***********98777776657777.********************4..3 PP

                            .SEE..EEEEE-S CS
                     B3  88 .sefelvvkvfrk 99 
                             ++++ v+ ++++
  Cse_sc010872.1_g020.1 220 dTDGKIVMELRKH 232
                            3899888888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MGDSLKIKPC FNCKDSSSVK LMNGWKDSTG EYVQLCYNCC SIYKAGQFCE MFHSDEDGWR  60
DCESCKQLIH CGCIVSLSDY MMHDSGGITC NECSDTSSLL GRDCSNDESH STDVTDLAND  120
TDLKSVLTPL FEKVVSATDS NLKTCRMRIP RQYAMDHFPK VNGTEVVPLN IIDTDGKEWS  180
VNFRCWPHYN KATYVMTGLK DFYVSKNLQT GDTVAFYRRD TDGKIVMELR KHSAQDLQAS  240
TDVGKQISIL GPVYTYVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21550.12e-24B3 family protein