PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010933.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 259aa    MW: 29524.7 Da    PI: 8.6999
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010933.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.94.7e-051081481055
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            ++ R+ + ++   L+++lP++     kK++  + Le++ +YIk Lq
  Cse_sc010933.1_g030.1 108 QQKRRTLSEKTRALQKILPWD-----KKMDMGTLLEETYKYIKFLQ 148
                            5568889999999*******9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDLHFQSLLT GKYPTHHHTP ATSDESSTTP PPQQPPHHHH LLKKPKLEHS TNYTSYLNSI  60
NPYHHPMIMF HQLPDLTSFE NLNYPPSLPP FLSQPRKTPT PSSREKQQQK RRTLSEKTRA  120
LQKILPWDKK MDMGTLLEET YKYIKFLQAQ VKVLELMPVD SSTTGSNFGS NEDDNVSVAN  180
VGYGTYGYYG NVYGGLERLN RQQLLEVIVN SPAAQAILCS RGCCVYSTEQ LVMFKDLAEK  240
NYASMLGILL MLKAKDEMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.14e-27bHLH family protein