PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010933.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GeBP

Protein Properties

Length: 344aa MW: 38960.9 Da PI: 4.2207

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010933.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	98	8.8e-31	143	232	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 +r+w+++Dei+lL G i++ +++g sp +d+d+fy+f+ +s+ +++ksql eKirrLKkKf+ +v+k ep f+k+hd k+fe+ Cse_sc010933.1_g040.1 143 KRVWTDDDEIMLLEGYIEYFSDKGCSPLSDLDDFYKFMMDSLPGNATKSQLYEKIRRLKKKFRVNVEK----GEPGFTKAHDGKVFEV 226 89****************************************************************....89********** PP DUF573 92 skkiWg 97 sk+iWg Cse_sc010933.1_g040.1 227 SKRIWG 232 ***8 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSSKKRSAPL DNPPSASSSD DDDDSSEEES EDDQQQPQQQ QQLNFSQPSS ESDEEEEENP 60 DAQNPNESSD EEDDESESDE EAQSPTFTKP KTLTLTPPSS SLDNSDIVSP SASDFAIKPS 120 KKIPPTKKIK TALFEDDKKM VNKRVWTDDD EIMLLEGYIE YFSDKGCSPL SDLDDFYKFM 180 MDSLPGNATK SQLYEKIRRL KKKFRVNVEK GEPGFTKAHD GKVFEVSKRI WGDEGCEDGK 240 RAKPKARVRP VKEMDVEEDE VEVVVEEKDF ETLYPYWNAG LVSEVSSSLK FPAGVVELVK 300 ENLSLIGEEK AKQMDEKWKV LFENETLLRR KRIALLSEVE NAEG

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSSKKRSAPL DNPPSASSSD DDDDSSEEES EDDQQQPQQQ QQLNFSQPSS ESDEEEEENP  60
DAQNPNESSD EEDDESESDE EAQSPTFTKP KTLTLTPPSS SLDNSDIVSP SASDFAIKPS  120
KKIPPTKKIK TALFEDDKKM VNKRVWTDDD EIMLLEGYIE YFSDKGCSPL SDLDDFYKFM  180
MDSLPGNATK SQLYEKIRRL KKKFRVNVEK GEPGFTKAHD GKVFEVSKRI WGDEGCEDGK  240
RAKPKARVRP VKEMDVEEDE VEVVVEEKDF ETLYPYWNAG LVSEVSSSLK FPAGVVELVK  300
ENLSLIGEEK AKQMDEKWKV LFENETLLRR KRIALLSEVE NAEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	6e-26	GeBP family protein