PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011083.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 106aa MW: 12895.7 Da PI: 11.056

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011083.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.1	6.4e-11	2	33	16	48
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 v+++G + W+ Ia+++ gR +kqc++rw+++l Cse_sc011083.1_g020.1 2 VEKYGVRKWSYIAQMLK-GRIGKQCRERWHNHL 33 99************9.***********97 PP
2	Myb_DNA-binding	53.4	5.9e-17	40	81	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + WT+eEd +l+ a+++ G++ W+ Ia++++ gRt+++ k++w+ Cse_sc011083.1_g020.1 40 DFWTEEEDRILIAAHAEVGNK-WSEIANKLP-GRTENSTKNHWN 81 67*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 106 aa Download sequence
MVEKYGVRKW SYIAQMLKGR IGKQCRERWH NHLRPDIKKD FWTEEEDRIL IAAHAEVGNK 60 WSEIANKLPG RTENSTKNHW NATKRRQFTR RKRRSKWPRP SPIEDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	93	KRRQFTRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-45	MYB family protein