PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011119.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 174aa    MW: 19783.5 Da    PI: 9.8073
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011119.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.41.1e-154082347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc011119.1_g030.1 40 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 82
                           89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
VQTVKAECQY CTNRRRRQAD TVSGNKRCKE LLSPNVQHRP FTPHEDDVIL RAHLIHGNKW  60
SVISKLLPGR TDNAIKNHWN STLRRRGLTL TRSSESESTH SYDGMMLLTR LPPGDGDKRK  120
GGDEVEKEIE DTCLVDVMKK MIAKEVRSYI DELRAKDGLS FGAVLRSVVN RVSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.19e-19MYB family protein