PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011137.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 151aa    MW: 17603.4 Da    PI: 10.6435
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011137.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK551.5e-17447649
                 RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                           s e++s+yF++p++ AAk  +v+ ++ K  CR  GIk WP+Rk+
  Cse_sc011137.1_g020.1  4 SREVISHYFHMPLHRAAKYFNVGSSLFKVHCRSVGIKCWPYRKL 47
                           7899***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MSFSREVISH YFHMPLHRAA KYFNVGSSLF KVHCRSVGIK CWPYRKLLGL EKLINYFHGK  60
DGDSNTNENM QEIITKLQEE KRRIKEIPEL AITNNTKKLR RRFFKATYRK KKHVNLELSL  120
APPIVADVET LQSSLMAVTR KSNNSGKHID T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198111KLRRRFFKATYRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-25Nin-like family protein