PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011282.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 269aa    MW: 29730.8 Da    PI: 4.4488
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011282.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.76.4e-29125178155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            ++rl+Wtp+LH+rFve+v++L G  kA+Pkti++lm+v+gL++e+v+SHLQkYRl
  Cse_sc011282.1_g030.1 125 RQRLVWTPQLHKRFVEVVAHL-GVTKAVPKTIMNLMNVEGLSRENVASHLQKYRL 178
                            58*******************.9*******************************8 PP
2Myb_DNA-binding44.92.7e-14127177148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r+ WT+++++++v++v+ lG     +ktI++ m+ +g++++++ s++qky+
  Cse_sc011282.1_g030.1 127 RLVWTPQLHKRFVEVVAHLGVTkaVPKTIMNLMNvEGLSRENVASHLQKYR 177
                            789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDEEVRLTDY DDVINVDNDD RVSEWELGLP NVDDLTPLSQ SLMSAEMLTA FSITPEPYRN  60
MTDVNRASQN TFSDLRSQPD LMKLDKVNGN CNVDGEVNGD GDGDGEGEGE GEGDVDDVAG  120
RVAKRQRLVW TPQLHKRFVE VVAHLGVTKA VPKTIMNLMN VEGLSRENVA SHLQKYRLYL  180
KRMGGGGGGG ASNSDNNVNL NDSGSTVPMP YHPQMMPMQP YQPMVPNGGY NGYEGSSYQY  240
NGMMQQRDWS GNSFGSVSAY HHRMTPNDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.14e-51G2-like family protein