PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011366.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 189aa MW: 22299.3 Da PI: 9.9668

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011366.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	90.4	2.1e-28	6	97	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 F++k+y+i++d++++++isw +ng +f+v++ e+ak+v pkyF h+nf SF+RQLn YgF+++ d+ +eF+h +F+k Cse_sc011366.1_g030.1 6 FVSKTYDIVDDPKTDHIISWINNGYAFFVWKLIELAKHVFPKYFTHTNFCSFIRQLNEYGFSRMGDDG---------TEFRHYNFRKY 84 9**************************************************************999.........68***** PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 +k+l +ikr+k+ Cse_sc011366.1_g030.1 85 EKSLHMQIKRRKK 97 ********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MVRPNFVSKT YDIVDDPKTD HIISWINNGY AFFVWKLIEL AKHVFPKYFT HTNFCSFIRQ 60 LNEYGFSRMG DDGTEFRHYN FRKYEKSLHM QIKRRKKFDI ERNRRPNNYI ARTTPPTSGN 120 PSEELEGPSN TSSISTDILI ALKRMRTKVE LSAKSIYDAD MSFSYKIFSE EIQRYIFPGS 180 FSQRGMNGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02990.1	1e-26	HSF family protein