PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011416.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 287aa    MW: 32738.2 Da    PI: 9.126
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011416.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.63.9e-1573117147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            r +WT +E++++++a k++G   W+ I +++g ++t+ q++s+ qk+
  Cse_sc011416.1_g030.1  73 REKWTHDEHKKFLEALKLYGRA-WAQIEEHVG-NKTAIQIRSHAQKF 117
                            789*****************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MQCFSGSYSF RIFHRVLPRR KLSSFIATEN MVEDLSEGYK SITGINNHMD DQITPCEDYA  60
LKSRKPYTIT KQREKWTHDE HKKFLEALKL YGRAWAQIEE HVGNKTAIQI RSHAQKFFSK  120
VVRESSDFDG TTVDHIEIPP PRAKRKPANP YPRNVHIPLT KGRHTAGPTS PCSLESNHEN  180
LSPDSQDQYA SIQSLKLFGK TVFVMDYARP SSPDTITTLP LNLTLTQAPE CPTTPCLSSD  240
NIFGSKGDKS YAKGFLPYKR CLAETRITHS FMLTIEESED LRVRLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.12e-38MYB_related family protein