PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011438.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 174aa    MW: 19254.4 Da    PI: 6.3592
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011438.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.63.7e-5826123198
                  NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 
                            vreqdrflPian+srimkk+lPan+k++kdaketvqecvsefisfvtseasdkcqrekrktingddllwa+atlGfedy+eplk+yl+
  Cse_sc011438.1_g020.1  26 VREQDRFLPIANISRIMKKALPANGKMAKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKLYLN 113
                            69************************************************************************************** PP

                  NF-YB  89 kyrelegekk 98 
                            +yre+eg++k
  Cse_sc011438.1_g020.1 114 RYREMEGDTK 123
                            *******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MAEGPASPGG GSHESGGDLS PRSSNVREQD RFLPIANISR IMKKALPANG KMAKDAKETV  60
QECVSEFISF VTSEASDKCQ REKRKTINGD DLLWAMATLG FEDYIEPLKL YLNRYREMEG  120
DTKGSGKGHE GSARKDGAQP DYREHLAHQG SYLQGLDYGN QQGQHMMVQM QGRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.14e-85NF-YB family protein