PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011698.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 136aa    MW: 15908.4 Da    PI: 8.7348
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011698.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF42.39.3e-141849132
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCd 32
                           k+ie+k+ r v f+kRrngi+KKA+E  vL++
  Cse_sc011698.1_g010.1 18 KFIEDKTSRIVAFTKRRNGIFKKASEFVVLTE 49
                           79****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MAMESMKRTK GRQALKLKFI EDKTSRIVAF TKRRNGIFKK ASEFVVLTES ILELYQEVHD  60
REIIQLLDVV CDNLKDEEQH ATIMMDTKDL RAKNVWEDPI GKLTPDEAQK VKKQLCEWQA  120
NVFNILDQQN QRGRAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65050.25e-08MIKC_MADS family protein