PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011936.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 270aa MW: 30033.5 Da PI: 7.1166

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011936.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00045	175	197	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F + L H+r+H Cse_sc011936.1_g010.1 175 HECSICGTEFFSGQALGGHMRRH 197 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MEFLPESSAE TSRYQAQQII TGKRMDHPRP CSSSYNVGSE EEEDMANCLI MLAQSVSPTK 60 KNNSDLNSQN TEKLKHRSLS NITYESYKYE CKTCNRFFHS FQALGGHRAG HKKPKLAVEE 120 DHNSVSTKTE IFIDDQPKLS VEEQEKNLIN TTNKSPSPPP GFIQTGCKTN KAKVHECSIC 180 GTEFFSGQAL GGHMRRHRTV PPSTNQIVVS TNMNATSAQY TSEKSPMLSL DLNLPAPEVV 240 DDVHSNFQFT SGSSKQHLAY PAAALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	1e-46	C2H2 family protein