PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011954.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 414aa MW: 44580 Da PI: 9.8065

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011954.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.7	4.1e-38	77	221	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssasec...e 74 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWLl++a +i+el+++ +c + Cse_sc011954.1_g040.1 77 SGGKDRHSKVLTSKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLLKAAASSIDELPSLdpafvgggvgsdV----LRChqmT 160 689***********************************************************6666655432220....1222222 PP TCP 75 aesssssasnsssg......kaaksaakskksqksaasalnlak.esrakarararertrekmrik 133 + ++++ + +++ks ++s+ s++s+ s l+l++ e r kar+rar ++k + Cse_sc011954.1_g040.1 161 TTEDKVGI-----StttttkNKSKSPECSSTSETSKGSGLSLSRsENRIKARERARVMASKKENVL 221 22222222.....13333437777777999**********9*********9555555443 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MEVDEFQRQV SKFQRVSSLG STTTSDNNNN SNSIKIATHG GGVNGHESNE MDLVGSGGVA 60 RLCGWPASRI VRVSRASGGK DRHSKVLTSK GLRDRRVRLS VSTAIQFYDL QDRLGYDQPS 120 KAVEWLLKAA ASSIDELPSL DPAFVGGGVG SDVLRCHQMT TTEDKVGIST TTTTKNKSKS 180 PECSSTSETS KGSGLSLSRS ENRIKARERA RVMASKKENV LNQVNNLSEN NNSSFTDLLT 240 GGGGGGGGLN VNVNVNVNAN NITTVNRPES RIHWTTSSTP MDYLFTRPSQ QLSSQHIQNP 300 QFHQQNHPQN QNHQFSFLQE TFPPTTTTGS SDGGYNLSFS MTPSSGGSAL GPGYSRGTLQ 360 SNLPSSILPH NHHHNLQRFH SAPIDGPQST NLPFFIVPNT GSDHFSGQGG KLVT

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MEVDEFQRQV SKFQRVSSLG STTTSDNNNN SNSIKIATHG GGVNGHESNE MDLVGSGGVA  60
RLCGWPASRI VRVSRASGGK DRHSKVLTSK GLRDRRVRLS VSTAIQFYDL QDRLGYDQPS  120
KAVEWLLKAA ASSIDELPSL DPAFVGGGVG SDVLRCHQMT TTEDKVGIST TTTTKNKSKS  180
PECSSTSETS KGSGLSLSRS ENRIKARERA RVMASKKENV LNQVNNLSEN NNSSFTDLLT  240
GGGGGGGGLN VNVNVNVNAN NITTVNRPES RIHWTTSSTP MDYLFTRPSQ QLSSQHIQNP  300
QFHQQNHPQN QNHQFSFLQE TFPPTTTTGS SDGGYNLSFS MTPSSGGSAL GPGYSRGTLQ  360
SNLPSSILPH NHHHNLQRFH SAPIDGPQST NLPFFIVPNT GSDHFSGQGG KLVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	5e-49	TCP family protein