PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011999.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family YABBY
Protein Properties Length: 182aa    MW: 19839.5 Da    PI: 9.4167
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011999.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY1489.3e-46201665165
                  YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesa 92 
                             s +++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l  ++++ +   + a +      +++    ++  ++++k  +      
  Cse_sc011999.1_g020.1  20 PSDQHLCYVRCNFCNTLLAVGIPCKRLLDTVTVKCGHCSNLSFLTIRASPPDQHALQ------TPPFSPFQGAFSSDFKRGQ------ 95 
                            56789***********************************98776654432222222......2333333333333333222...... PP

                  YABBY  93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWa.hfPk 165
                            s+s ss   s++++  +p++p v++PPek+ r Psaynrf+keeiqrikasnP+i hreafs+aaknWa h+P+
  Cse_sc011999.1_g020.1  96 SSSSSS---STSNEPTSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKASNPSIPHREAFSTAAKNWAgHVPN 166
                            222222...45667789999************************************************978886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MNFEVQADRV VNVDPPAQTP SDQHLCYVRC NFCNTLLAVG IPCKRLLDTV TVKCGHCSNL  60
SFLTIRASPP DQHALQTPPF SPFQGAFSSD FKRGQSSSSS SSTSNEPTSP KAPFVVKPPE  120
KKHRLPSAYN RFMKEEIQRI KASNPSIPHR EAFSTAAKNW AGHVPNSLTG SLSTGLDLSG  180
LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.14e-53YABBY family protein