PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012015.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 303aa    MW: 33369.9 Da    PI: 8.0235
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012015.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.5e-124286147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  Cse_sc012015.1_g020.1 42 RESWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 86
                           789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MSTPPPTTTA PATTAAAVSP PSSAADDASK KIRKPYTITK SRESWTEPEH DKFLEALQLF  60
DRDWKKIEAF IGSKTVIQIR SHAQKYFLKV QKSGTNEHLP PPRPKRKAAH PYPQKAPKNA  120
PALSNVTASF QASPALSDPE LMPSDASTVV KNSVETGSLT SKTKGKVHLL VDDMAPGGLP  180
TAVNCCSSNE STPKTRTTTE IHEQRGLGIP LRVLPDFAQV YDFIGSVFDP NTIGHVQRLK  240
KMDPIDVETV LLLMRNLSIN LTCPDFEEHR KLLSTYEVDL DKENLKDHVD VLNCQPEQVG  300
HFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.22e-93MYB_related family protein