PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012158.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 190aa MW: 21452.3 Da PI: 7.8435

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012158.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.9	9.7e-13	80	122	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT +Ed ll+++vk++ tW+ Ia+ ++ gR + c +rw kyl Cse_sc012158.1_g030.1 80 VWTNDEDNLLIELVKKYN--TWREIAEQIP-GRADVVCCHRWVKYL 122 6**************7..7*****.***********97 PP
2	Myb_DNA-binding	45.4	1.9e-14	128	174	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ +v+ ++ G+ tW++Ia+ ++ gR+ qc +rw ++l Cse_sc012158.1_g030.1 128 KGPWTKEEDDHIVKTFEANGKMTWSKIANDLP-GRSSIQCEERWDNHL 174 79****************************.*********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MSAPVDVDVV VGKAPNHDDI KVMEGDVGMK SEPHSVELKK EAGSTSSSVS CCIFSSCDGN 60 TLRSHRDRGN IARTRSPSVV WTNDEDNLLI ELVKKYNTWR EIAEQIPGRA DVVCCHRWVK 120 YLNPEINKGP WTKEEDDHIV KTFEANGKMT WSKIANDLPG RSSIQCEERW DNHLDPAIKR 180 KKGVKKRNPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	9e-31	MYB family protein