PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012169.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 172aa MW: 20288.7 Da PI: 10.2328

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012169.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00039	44	65	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 y+C+ C+k+F++ L H+ Cse_sc012169.1_g070.1 44 YECKTCKKRFKSFQALGGHQGI 65 99*********99999888755 PP
2	zf-C2H2	17.5	1.1e-05	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F + +L H+r+H Cse_sc012169.1_g070.1 94 HQCKMCTKVFETGQMLGGHMRKH 116 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
SSDMMIIKLK KTNRKQSDNK CRKMVIFKHL EESSGLQETE EHGYECKTCK KRFKSFQALG 60 GHQGIHRKIR PNDDNNVDVM CMLSLNIIPT GSLHQCKMCT KVFETGQMLG GHMRKHRDEK 120 ALNLIKKQEL WRQKSDSVLT MEEVERRKAE VDERMRVRRE LILAAKELRL WF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46080.1	1e-19	C2H2 family protein