PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012344.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 110aa    MW: 12705.3 Da    PI: 8.6027
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012344.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.42.4e-082848626
                           -SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH  6 CrffartGtCkyGdrCkFaHg 26
                           C +++rtG+C +G++C+F+H 
  Cse_sc012344.1_g010.1 28 CFHYLRTGWCGFGSQCQFNHL 48
                           779*****************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
EWYLWKLGLG EGENEKEVYP ERPYKGDCFH YLRTGWCGFG SQCQFNHLRD RASSIVGTMS  60
GRHGNYPERM GQPVCKYHDY HHPRPPKQGM GFGSYNPVAL NVLGYPLRPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06410.13e-27C3H family protein