PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012380.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 227aa    MW: 25156.6 Da    PI: 7.9904
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012380.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-06106128326
                            S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                            + +C +far G C+yG  CkF H+
  Cse_sc012380.1_g010.1 106 RNPCINFAR-GACHYGMGCKFVHD 128
                            679******.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MEAYLGKIET TATILANLDL PITNDDLVHC ALEGLSDKYD QVCGIMHHRE TFPDFKTARS  60
MLITEEMRLK NRFIALLVDS TSSSPLVLMT DKGIARNPSN PQVKSRNPCI NFARGACHYG  120
MGCKFVHDSN NKNTHRPIEN KQNSDTEEIV LKLLGRLGIT GNNNPQQIPL SRPNHIASSP  180
SAYVTQAHTS PSPTAHPYYT HQTGPGHQMI PHLVLITHQP ITLSPHP