PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012446.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 195aa    MW: 20729 Da    PI: 6.0112
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012446.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB186.61.8e-5815110297
                  NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                            reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+k
  Cse_sc012446.1_g020.1  15 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLAK 102
                            89************************************************************************************** PP

                  NF-YB  90 yrelegek 97 
                            yre+egek
  Cse_sc012446.1_g020.1 103 YREMEGEK 110
                            ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MADSDNEAGG ELSAREQDRF LPIANVSRIM KKALPANAKI SKDAKETVQE CVSEFISFIT  60
GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKVYL AKYREMEGEK TIGRQGENDG  120
SSGGGGGANP GGYNDGGGMY GGMQNSMVMG RTQHQMYNSN PGSYQQMSLG SPKGGLGRSG  180
SFGGGSGGSS TVKPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-72NF-YB family protein