PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012547.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 245aa    MW: 27189.7 Da    PI: 7.9012
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012547.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.6e-20118152135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  Cse_sc012547.1_g020.1 118 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 152
                            ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MNRCTGSTMM GPCSCGLYHY QQNSFSSIFP MPYEQEMCPY GSSPSSVDCT LSLGTPSTRM  60
SSNDYEKTHS EKRRGSNWWN ILQSSSNSPT PSSQKASRGS SNGNGNGNGS DSLFSRRCAN  120
CDTTSTPLWR NGPRGPKSLC NACGIRYKKE ERRANAAAAA AVSTGGSDAS EGYHHHQYMM  180
NNNGNNQWVN DQYYSQSTYK MPSCYSPAAA SNEFRFMDHD MDDRDSPFLS WRLNVTDRPG  240
LVHDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36620.13e-40GATA family protein