PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012587.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 618aa MW: 71378.6 Da PI: 9.058

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012587.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.2	3e-09	133	215	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90 A++ GF ++k ++k+ g ++ +f+Cs++g++++e + ++ +r++++ +t+C +l k k ++ w + l HnH+++ Cse_sc012587.1_g020.1 133 AQSNGFLIVKGRTKTD--RGYKYSIEFKCSRHGTSAREGLE-DELQRHTSTAKTNCPFRLLAKYIKgqTNGWILRVKCLRHNHHFV 215 8899*****98888..6667***********9999.888999999*******9998878889999889***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MLQSEILSHF TIHSVSVIII ASENFKAQIR RLQSEIKNLT LPSIRFRLSS SPHKSHKFKT 60 AQVTTAQVTS SQDSQTAQAS QQQATTPTSK KATGLSPPQE SRQHKCHSPP QQATAPQVFP 120 DEDVLTNWVQ YIAQSNGFLI VKGRTKTDRG YKYSIEFKCS RHGTSAREGL EDELQRHTST 180 AKTNCPFRLL AKYIKGQTNG WILRVKCLRH NHHFVDSFHG FPQAMRLKEN ELVLVEQLTK 240 HKVAPGIILS SLKESNPDNV SNIKTIYNAQ NKIRGAIRGD MTPIQVLLAH LRHQGYTYYP 300 RVNDRTNELE EIFFVHPTSY ALWTTFPEIM LMDSTYNTTL FKLPFFTIVG VTSTNRTFSM 360 AFSFLNCEKE PNFKWVLECF KRVIEEQYYT RVIVTDRDLA LLGACGAEFP NSNKLLCRWH 420 INQNVLKHCR HKFDTEEEYA SVRWTWDLMV KAPTQDVFKY YYQHLQDLLV QKQTVLRYFN 480 NWLQHYDCMF VSYITDQYRN FGQTTTCRVE GQHALLKLYL GSTQSNSDTL LSSVDKILVA 540 QETAIKDSFN TSIIKKLHAC KGTLFDELRY NVSKHALLLI VAESKRDMDP HECGHQLRLV 600 CGLPCYHELF YYQLHGMC

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MLQSEILSHF TIHSVSVIII ASENFKAQIR RLQSEIKNLT LPSIRFRLSS SPHKSHKFKT  60
AQVTTAQVTS SQDSQTAQAS QQQATTPTSK KATGLSPPQE SRQHKCHSPP QQATAPQVFP  120
DEDVLTNWVQ YIAQSNGFLI VKGRTKTDRG YKYSIEFKCS RHGTSAREGL EDELQRHTST  180
AKTNCPFRLL AKYIKGQTNG WILRVKCLRH NHHFVDSFHG FPQAMRLKEN ELVLVEQLTK  240
HKVAPGIILS SLKESNPDNV SNIKTIYNAQ NKIRGAIRGD MTPIQVLLAH LRHQGYTYYP  300
RVNDRTNELE EIFFVHPTSY ALWTTFPEIM LMDSTYNTTL FKLPFFTIVG VTSTNRTFSM  360
AFSFLNCEKE PNFKWVLECF KRVIEEQYYT RVIVTDRDLA LLGACGAEFP NSNKLLCRWH  420
INQNVLKHCR HKFDTEEEYA SVRWTWDLMV KAPTQDVFKY YYQHLQDLLV QKQTVLRYFN  480
NWLQHYDCMF VSYITDQYRN FGQTTTCRVE GQHALLKLYL GSTQSNSDTL LSSVDKILVA  540
QETAIKDSFN TSIIKKLHAC KGTLFDELRY NVSKHALLLI VAESKRDMDP HECGHQLRLV  600
CGLPCYHELF YYQLHGMC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-15	FAR1 family protein