PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012692.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 143aa    MW: 16717.7 Da    PI: 4.7296
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012692.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS57.13.7e-182101202301
                   GRAS 202 laVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                            l+V ++++  +llde+v ++ +r++vL+l ++++ ++++ +  + ++n+  F +rf eal y+s++fd++ea++ re+ er+ + + l
  Cse_sc012692.1_g050.1   2 LIVYCAYRFRYLLDETVVVDCPRNKVLSLTRKMKLDMFIQAVINGSYNALFFITRFREALFYFSSMFDMIEANATRETPERMLLKKNL 89 
                            89************************************************************************************** PP

                   GRAS 290 lgreivnvvace 301
                              +e++nv+ac 
  Cse_sc012692.1_g050.1  90 WVQEAMNVIACD 101
                            ***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MLIVYCAYRF RYLLDETVVV DCPRNKVLSL TRKMKLDMFI QAVINGSYNA LFFITRFREA  60
LFYFSSMFDM IEANATRETP ERMLLKKNLW VQEAMNVIAC DVVPDPFEQR NNEVDISDRS  120
FPLVLSLEEV AGSMLITFCI MLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.14e-34GRAS family protein