PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012959.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YB

Protein Properties

Length: 174aa MW: 19690.3 Da PI: 5.3473

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012959.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.1	7.2e-55	21	116	1	96
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 vreqdr++Pianv+rim+++lP++akis+daket+qecvse+isfvt+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+vyl+ Cse_sc012959.1_g020.1 21 VREQDRLMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFVTGEANDRCQREQRKTITAEDILWAMSKLGFDDYIEPLTVYLH 108 69************************************************************************************ PP NF-YB 89 kyrelege 96 +yreleg Cse_sc012959.1_g020.1 109 RYRELEGG 116 ***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MMQPPPEVTS KSVTRDNECL VREQDRLMPI ANVIRIMRRI LPSHAKISDD AKETIQECVS 60 EYISFVTGEA NDRCQREQRK TITAEDILWA MSKLGFDDYI EPLTVYLHRY RELEGGERGS 120 ARGFDPTTKA FGNDVFQMGH RFFGPATIGG FMKDPTVAGP SRPVAGFEPY AQLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	2e-67	NF-YB family protein