PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013006.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 232aa    MW: 26317.2 Da    PI: 7.723
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013006.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.7e-1664106347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc013006.1_g010.1  64 PFTPHEDDAILRAHVIHGNK-WSVIPKLLP-GRTDNAIKNHWNST 106
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
LIEAMSRLAS SMDPRRRRQA DTVSRNTGCE KLVCDQVKYT QKMRQVMSPP LVCNQLNPNV  60
QHRPFTPHED DAILRAHVIH GNKWSVIPKL LPGRTDNAIK NHWNSTLRRR CVSVSDVSSC  120
DGMTVLTLLP PRDDGEKKKE DDEVEKGMVE IEDTCLVDVM KKMIAKEVRS YNDELRANDG  180
LSFGPVLSQE MTRFCACLVD VMKKMIAKEV RSYNDELRAN DGLSFGPVLS QE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.12e-23MYB family protein