PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013015.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MIKC_MADS

Protein Properties

Length: 191aa MW: 22279.5 Da PI: 8.6189

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013015.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	75.9	3.1e-24	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie++ r+v+fskRrng++KKA+EL vLCd++v +fs t++lyeys+ Cse_sc013015.1_g010.1 9 KRIEDNGSRHVSFSKRRNGLMKKAHELAVLCDVDVGCFVFSGTNRLYEYST 59 79***********************************************96 PP
2	K-box	23.3	2.6e-09	123	179	42	98
K-box 42 dLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ + eL qLe+q++ l+ +R++K++l+le ++ lq+k+++l++e++ L+++l Cse_sc013015.1_g010.1 123 KVQQSDTTELWQLEKQIQPVLQLVRTRKTQLMLEAVKALQEKKNQLSKEKQVLEREL 179 56666789********************************************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MGRGKVELKR IEDNGSRHVS FSKRRNGLMK KAHELAVLCD VDVGCFVFSG TNRLYEYSTG 60 ESSMIKILTR YQDYKNTDEI VRRTVREKLA SEQRDVCTAD ELTEMVQRQL EDHKVKLQLE 120 DHKVQQSDTT ELWQLEKQIQ PVLQLVRTRK TQLMLEAVKA LQEKKNQLSK EKQVLERELL 180 AARLNESNVD C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65050.2	1e-34	MIKC_MADS family protein