PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013024.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 253aa    MW: 29006.8 Da    PI: 8.9869
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013024.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18122171255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr ++ +gr++AeIrdp+    rkr++lg+++t+eeAa  +++a+  l g
  Cse_sc013024.1_g020.1 122 KYRGVRKRP-WGRYAAEIRDPTA---RKRVWLGTYDTPEEAASVYDNAAVVLQG 171
                            8********.**********943...4*********************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MKTKTTPSVQ QPVIKLTEHV VTTHKFKTTP FRDQNKNQIV KITMTDPYAT DSSDDDDVIR  60
TRVKKHVSEI NVTSETPLER FVQTSNLRRV RRVERVESVL KKNDENKKRV RRVRRCEGVT  120
RKYRGVRKRP WGRYAAEIRD PTARKRVWLG TYDTPEEAAS VYDNAAVVLQ GHNAVTNFPV  180
FTESVEKPLP SSNGGLLSPK SVLPFDDELT AFDELACADV ELFGYDYIGG PINLPDFKEF  240
GDFDIDEFLL DVR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114130RRCEGVTRKYRGVRKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-28ERF family protein