PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013039.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 224aa    MW: 24467.4 Da    PI: 7.8384
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013039.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260146.95.6e-4681071100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+
  Cse_sc013039.1_g020.1   8 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLR 95 
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallkee 100
                            ql+ +l ++k+e
  Cse_sc013039.1_g020.1  96 QLQMDLTYAKSE 107
                            ******999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MASSSNSPCA ACKFLRRKCQ PECVFAPYFP PDQPQKFANV HKVFGASNVT KLLNELHPHQ  60
REDAVNSLAY EADMRLRDPV YGCVGVISLL QHQLRQLQMD LTYAKSELSK FQNHNLSGTT  120
AQGLIAAAAA AAAATHHQTL GNNLISCCSG GVTRDNLYHQ HQQFFSPRDQ QTSIIRAFDI  180
NNNYDTTAGV LAMNISSGGI GQHPQFQQPR GAGADDRPTT IDPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.34e-80LBD family protein