PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013049.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 348aa    MW: 40022.7 Da    PI: 6.061
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013049.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK31.14.8e-10336538
                 RWP-RK  5 isledlskyFslpikdAAkeLgvclTvLKriCRq 38
                            s e++ +yF+  i+ AAke +v+ T+ Kr CR 
  Cse_sc013049.1_g020.1  3 FSREVITQYFNILIARAAKEFNVGITIFKRNCRD 36
                           57899****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MEFSREVITQ YFNILIARAA KEFNVGITIF KRNCRDVRKK ESREFGTVVN RPKRRNTPLQ  60
TIYPTRESDY EKMDDSYGSD CDEQSLINID LEIESDYEEM DDSYGSDYDE QSQINIDLEI  120
IQHTISGGAL HSPITQTTHG QEASSSTSMK DAGGALHSAI THTTHGQEAS SSTSMRAAER  180
VNKAKTVVNA SFSLCFQEGK MLLQKYKETP LPLKTLLDYE DPARTRFRDQ IRVYNGMFSF  240
TSFGARIDHS IYWGRRLYTF RINGQNYHLI VSLLPKEGIQ PQYAQLYFFD TQNETQNRMY  300
AFIDKETVNQ VDESVIASLI TMLDKTSTVA KAFRMTRDWC HSYNSSNF