PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013054.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 227aa    MW: 25441.4 Da    PI: 8.5767
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013054.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.3e-173782147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+W++eEd  l ++v  +G+++W++I++++  gR++k+c++rw + 
  Cse_sc013054.1_g010.1 37 KGPWSAEEDRVLTRLVDSYGPKNWSLISKYIK-GRSGKSCRLRWCNQ 82
                           79*****************************9.***********985 PP
2Myb_DNA-binding53.36.3e-1791133347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +++  Ede ++ a++q+G++ W+tIar ++ gRt++ +k++w++ 
  Cse_sc013054.1_g010.1  91 PFSISEDETILAAHAQYGNR-WATIARLLP-GRTDNAVKNHWNST 133
                            67889***************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MEALNRCSSA TSSSSESTDS SYSGLKPEYS NKTSKIKGPW SAEEDRVLTR LVDSYGPKNW  60
SLISKYIKGR SGKSCRLRWC NQLSPNVQHR PFSISEDETI LAAHAQYGNR WATIARLLPG  120
RTDNAVKNHW NSTLKRRKVD TQEMMLFSLG KDGGRSSPSG SNENVGTDVE DPMTTLSLGL  180
PGMGECRRPE KSTECVQEGF WNVMRGVVER EVREYVTTSY CDNQGFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.13e-56MYB family protein