PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013071.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 355aa MW: 40517.6 Da PI: 7.8613

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013071.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.7	1.7e-51	17	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + pGfrFhPtdeelv +yLkkk++++ l++ e ik+vdiyk++PwdLp+ + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+ Cse_sc013071.1_g040.1 17 MLPGFRFHPTDEELVGFYLKKKIQHRVLPI-ELIKQVDIYKYDPWDLPNLAPSSEKEWYFYCPRDRKYKNSARPNRVTGAGFWKATGT 103 579*************************.89***********8888899***************************** PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++s+ ++ +glkk+Lvfy+gra kg ktdW+mhe+rl Cse_sc013071.1_g040.1 104 DRPIYSSdgASKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 145 **9655666*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDEHKSSEVD KMDHEVMLPG FRFHPTDEEL VGFYLKKKIQ HRVLPIELIK QVDIYKYDPW 60 DLPNLAPSSE KEWYFYCPRD RKYKNSARPN RVTGAGFWKA TGTDRPIYSS DGASKCIGLK 120 KSLVFYRGRA AKGIKTDWMM HEFRLPTLVE PAPNKKVQDE SLSSNEAWAI CRIFKKTNSI 180 TPRAISHSWL STLTEDRPSE CFPHSDQFSP EKNSCMTTHL YNTIKPASIN SFPALETPLY 240 RALNLTACKP STFPRSYTEF TNGFVFSSTD TPESRVLNNE DASKNSGSIG FGGEQQPFDN 300 FPMNNLYHSN ELGNVRTITG FPFNFPEKVV ADEWKINMAW DSPPGPSEST TYSTK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDEHKSSEVD KMDHEVMLPG FRFHPTDEEL VGFYLKKKIQ HRVLPIELIK QVDIYKYDPW  60
DLPNLAPSSE KEWYFYCPRD RKYKNSARPN RVTGAGFWKA TGTDRPIYSS DGASKCIGLK  120
KSLVFYRGRA AKGIKTDWMM HEFRLPTLVE PAPNKKVQDE SLSSNEAWAI CRIFKKTNSI  180
TPRAISHSWL STLTEDRPSE CFPHSDQFSP EKNSCMTTHL YNTIKPASIN SFPALETPLY  240
RALNLTACKP STFPRSYTEF TNGFVFSSTD TPESRVLNNE DASKNSGSIG FGGEQQPFDN  300
FPMNNLYHSN ELGNVRTITG FPFNFPEKVV ADEWKINMAW DSPPGPSEST TYSTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	2e-96	NAC family protein