PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013080.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 260aa    MW: 28461.1 Da    PI: 8.4866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013080.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-10140190455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                            +h+ +Er RR++i +++  L++l+P +  ++      Ka +L + ++YI+sLq
  Cse_sc013080.1_g040.1 140 SHSLAERARREKISERMKILQDLVPGC--NKVCIvIGKALVLDEIINYIQSLQ 190
                            8*************************6..499999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDPPIINETS FSTANPSAYT LAGIWPFSSV RMGGRNVSTG DDESMVITEF GAGGRRKREV  60
NFEDEFSKIV CTNSGNDLNK VNGKRMKISG SKDELGGSKI DQEGNSGSGS KAAVGQTHKQ  120
PEPPKDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVC IVIGKALVLD  180
EIINYIQSLQ HQVEFLSMKL EAVNTRMNSP VEGFPTKDLG PPPFDAAGLL FGSQVARQFA  240
HGSQPEWLHM QLGNNFGRTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.15e-83bHLH family protein