PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013080.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 328aa    MW: 36832.3 Da    PI: 5.7013
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013080.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.2e-1472113346
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            ++T++E+el+++++   G++ W  Ia+ ++ gRt++++k++w++
  Cse_sc013080.1_g050.1  72 SFTPQEEELIIKLHSAIGSR-WPVIAQQLP-GRTDNDVKNYWNT 113
                            69******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MVKPPCCDKI NMRKGTWNAE DDAQMLAFVT KQPTSNWQAG APKKQGIRRC SGKSCKLRKT  60
NVTKNDHIRQ ESFTPQEEEL IIKLHSAIGS RWPVIAQQLP GRTDNDVKNY WNTKLKKKLS  120
AMGIDPVTHR PFSQMLADYG NISGLTRTQT RMGSLSRDNK NTFFMSNQEI IQQETLFPNF  180
NNNVKMEPPE VIKTDSLDLL TQLQAITHVQ DSSTNHEISF TQFHVSVASS SSSSSSTCST  240
LNEMTPQQTF NWRDFLIENS QDGNVNEEKL SFEAIGEIEL VKGNTTSTNG VKETTEEACD  300
GSFVEAMLNG ENDMLLDFPG LLGEPSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.15e-55MYB family protein