PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013096.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 185aa    MW: 20807.9 Da    PI: 8.4883
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013096.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.3e-182776255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            y+GVr ++ +g+Wv+eIr p++   + r++lg+f tae+Aa+a++ a+++++g
  Cse_sc013096.1_g030.1 27 VYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTFSTAEMAARAHDVAALSIKG 76
                           59****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MAELPNQSLN SKTRPKPIIS KKQRPQVYRG VRMRSWGKWV SEIRQPRKKS RIWLGTFSTA  60
EMAARAHDVA ALSIKGKAAV LNFPQLKDLL PRAVSLDPHD IRAAAVKAAT MHELNMPLVH  120
DDECDSSDDE LGQIIELPRL EDLDSRLPGS LAKFMVVDSV DGWMYPFDGF SSSDFADQMV  180
KELSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-49ERF family protein