PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013125.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 231aa    MW: 26632.8 Da    PI: 7.2804
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013125.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.61.2e-28170228159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            +dDg++WrKYG+K+vk+s++pr+Y++C++ gC+vkk++er+a+d ++v++tY g Hnh+
  Cse_sc013125.1_g030.1 170 VDDGFKWRKYGKKKVKSSPYPRNYFKCSTVGCSVKKRIERDANDINYVITTYDGVHNHK 228
                            59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MFPSVSHTNR RPSQQQTEIS VSSPFYYSLD TNYDQACEFT FEEIFDNYQP SIDEQPSYKE  60
STHTDFAAHC GVFEQNRVFQ EKVIVDDQVS SFVDFEAHSS TNEHNSIMHK AITNGSTSKR  120
STTANISLMP QAINFYMQLI LFLKLDAEKR EMSHAGLKLA LRMKTQLEVV DDGFKWRKYG  180
KKKVKSSPYP RNYFKCSTVG CSVKKRIERD ANDINYVITT YDGVHNHKDS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.13e-32WRKY family protein