PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013142.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 172aa    MW: 18985.6 Da    PI: 5.1225
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013142.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC55.31.5e-171156143
                  NF-YC  1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaea 43
                           ql+sfw++q   ie+++dfkn  lPlar+kki+k+dedv+mis+ea
  Cse_sc013142.1_g090.1 11 QLQSFWANQyreIENVNDFKNCVLPLARVKKIMKVDEDVRMISSEA 56
                           89******99999*******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MLQQQQQVQQ QLQSFWANQY REIENVNDFK NCVLPLARVK KIMKVDEDVR MISSEAHGDF  60
NLTLLDHLIA EPGLNNVGCC NELNVGYAAD GYARSRGVGA CVVTFTVGGL SVLNAIVGAY  120
SESLPIICIV GGPNSNEYGT NRILHHTIGL ADFSQELCCF QTVTCFQVYN HV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.17e-18NF-YC family protein