PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013257.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 308aa    MW: 34829.2 Da    PI: 7.3738
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013257.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.51.1e-1845159190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 
                            +fY +Y+++ GF+ r+  ++k k     t + f+Cs++g +++++ k                          ++k+ r++++ r++C
  Cse_sc013257.1_g050.1  45 NFYVAYGRKGGFECRRGGQYKAKGFSDATLKYFYCSRQGLDQDSNGKygdtiidndiseqseisddshrfgdvKKKQTRKTTSFRCSC 132
                            6*****************************************999999***********************87777778888889999 PP

                   FAR1  63 kaklkvkkekdgkwevtkleleHnHela 90 
                             a+l++kk   + +evtk+e  HnH+l+
  Cse_sc013257.1_g050.1 133 SASLTIKKV-GNIYEVTKFEDGHNHPLV 159
                            999999999.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
VETVQIKDHV CFYVCGKDGA RTWYPDCLEK PIEGCQFISV DQAYNFYVAY GRKGGFECRR  60
GGQYKAKGFS DATLKYFYCS RQGLDQDSNG KYGDTIIDND ISEQSEISDD SHRFGDVKKK  120
QTRKTTSFRC SCSASLTIKK VGNIYEVTKF EDGHNHPLVS ENYMIFLKNS RKMGYTKQHF  180
LYQVSNANFG PAVGFRLMKQ VYGGFDRVGT TVIDCKNQKM RISVFIGDRD AQMAVEKLLS  240
RKLHSPSDDD KLVGLFLADE EAIKDYASFG DDDKLVGLFL ADEEAIKDYA SVGSMYSNQT  300
NLNSLLRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-15FAR1 family protein