PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013270.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 324aa    MW: 37864.4 Da    PI: 7.2414
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013270.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.81.4e-5571361129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 
                            +ppGfrFhPtdeelv++yL+kk+++++++l +vik++d+y++ePwdL++  k+ + e++ewyfFs++dkky+tg+r+nratk+g+Wka
  Cse_sc013270.1_g020.1   7 VPPGFRFHPTDEELVDYYLRKKIASTRIDL-DVIKDIDLYRIEPWDLQElcKLGTdEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKA 93 
                            69****************************.9***************954544443556***************************** PP

                    NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                            tg+dk+++s k++lvg++ktLv+ykgrap+g+k+dW+mheyrle
  Cse_sc013270.1_g020.1  94 TGRDKSIYS-KHNLVGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 136
                            *********.899*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MNNFSHVPPG FRFHPTDEEL VDYYLRKKIA STRIDLDVIK DIDLYRIEPW DLQELCKLGT  60
DEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKSI YSKHNLVGMR KTLVYYKGRA  120
PNGQKSDWIM HEYRLETNEN GATQAKGWVV CRVFKKRITT VRRMDEHDSL CWFDDQVSFM  180
PNFESPRRIT HPHTSNSSYH HQLTAKPELD QLHYSLTHDH SFLQLPQLES PKIQQTFQPS  240
NHQLNINMFY GKNSEQDLQV TDWRVLDKFV ASQLSNDQDP SNPPPSSAQM VEHMNLLLSD  300
SKSDEIASEC ASISTSSCQV DLWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-132NAC family protein