PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013275.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 225aa    MW: 25061.4 Da    PI: 8.0597
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013275.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-171459147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+eEd +l+++v+  G ++W+ I + ++ gR++k+c++rw + 
  Cse_sc013275.1_g010.1 14 KGSWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 59
                           799*****************************.***********985 PP
2Myb_DNA-binding48.81.7e-1568110347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc013275.1_g010.1  68 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 110
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MTLSNEDINL LKKKGSWTPE EDAKLIQLVE TQGARNWSVI GSSIPGRSGK SCRLRWCNQL  60
SPNVQHRPFT PHEDDVILRA HLIHGNKWSV ISKLLPGRTD NAIKNHWNST LRRRGLTRSS  120
ESESTQSDDD ECLGLKNKRR CVSVSDVSSC DGMTLLTLLP PGDGEKKKGG GDEVEKGTVE  180
INDTCLVDVM RKMIAKEVRS YIDELRAKDG LYFGAVMCPV AQQSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.16e-45MYB family protein