PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013308.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 102aa    MW: 11696.8 Da    PI: 9.6822
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013308.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF21.13.9e-0716471344
                           HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
                 SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstg 44
                           f  R +g+  K +ELS+LC + ++ i++s ++
  Cse_sc013308.1_g030.1 16 FKIRMEGMKRKLSELSILCCIHASAIVYSRNN 47
                           4459999999*******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MKLTFMTNDS GIKSFFKIRM EGMKRKLSEL SILCCIHASA IVYSRNNPQP EVWPNSMGVY  60
NMLAQFLRTP VINWFRNNSM GVYNVLAQLC MKNLNDLGSL VD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65300.12e-14M-type_MADS family protein