PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013324.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 335aa    MW: 37899.5 Da    PI: 7.3438
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013324.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.72.9e-36371292103
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl+k+y++++d+++++++sw e+  +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fkkg
  Cse_sc013324.1_g040.1  37 FLTKTYQLVDDPNTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEYFKKG 115
                            9*****************************************************************99.........*********** PP

                            XXXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkkse 103
                            +k+ll++i+r+k++
  Cse_sc013324.1_g040.1 116 EKHLLCEIHRRKTS 129
                            ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MPIHAAWEAI PTPIGMGDTD SDTAWVANSH KAVPAPFLTK TYQLVDDPNT DHIVSWGEDD  60
ATFVVWRPPE FARDLLPNYF KHNNFSSFVR QLNTYGFRKI VPDRWEFANE YFKKGEKHLL  120
CEIHRRKTSQ PQVAHHHPQH HFSANNGFFA YPTTRSISPP DSDDHLYSDN SPPLCSPTTT  180
SANTAAGMLG MFHTRNSNSV TALSEDNERL RRSNNMLMSE LAHMRKLYND IIYFVQNHVK  240
PVAPSNSYPS SIIRSSNNGN MNGQVLMQKQ HGSAMNVENE NDNVTRTKLF GVPLMSKKRL  300
HPEYGSNATM VEAHKARLVL ENDDLGLNLM PPSPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-102HSF family protein