PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013426.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LFY
Protein Properties Length: 418aa    MW: 46503.3 Da    PI: 7.2422
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013426.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY636.15.6e-19473941385
                FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaark...lr......eleelfkayGvryltvakiaelGftvstLv 79 
                            mdp+a+sa+lfkwd+ra+ a+p++rl+e  +++++p+++ aa+a +    +r      +lee+f+ayGvry+t++ki+elGft++tL+
  Cse_sc013426.1_g020.1   7 MDPDALSANLFKWDTRATLAPPSSRLYEPITLHQPPQSMVAASAPMGsylVResrdlgGLEEVFHAYGVRYYTATKISELGFTAHTLL 94 
                            9****************99999999999999988884433333222211244777777****************************** PP

                FLO_LFY  80 dmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeg 167
                            dmkdeeld++m+sls+ifr++llvGeryGikaavraerrr++eee  ++rr lls+d++++ldalsqeglseepvq+e+eaagsgg+g
  Cse_sc013426.1_g020.1  95 DMKDEELDEMMNSLSHIFRWELLVGERYGIKAAVRAERRRIDEEE--SRRRYLLSNDNANTLDALSQEGLSEEPVQQENEAAGSGGGG 180
                            *******************************************87..89999********************************9998 PP

                FLO_LFY 168 lgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdL 255
                             g++el+++ +    + k+   +++ k+ + ++ +s+ ++  +++e+ed+ ++g +g erqrehPfivtepgevargkknGLDYLf+L
  Cse_sc013426.1_g020.1 181 -GAWELAVIGRCGGVKAKHGV-QRRIKKGRIES-SSHAHHGGDDNESEDDPDNG-GGAERQREHPFIVTEPGEVARGKKNGLDYLFHL 264
                            .99999999964433333333.33344444333.33433444444444444444.477****************************** PP

                FLO_LFY 256 yeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykp 343
                            yeqCrefL+qvq+iake+GekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdee snalrra+kergenvGawrqacykp
  Cse_sc013426.1_g020.1 265 YEQCREFLVQVQNIAKEKGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEGSNALRRAYKERGENVGAWRQACYKP 352
                            **************************************************************************************** PP

                FLO_LFY 344 lvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerska 385
                            lv+iaarqgwdida+fn+hprLsiWYvPtkLrqLCh+ers+a
  Cse_sc013426.1_g020.1 353 LVTIAARQGWDIDAIFNSHPRLSIWYVPTKLRQLCHAERSAA 394
                            ***************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MCEKTKMDPD ALSANLFKWD TRATLAPPSS RLYEPITLHQ PPQSMVAASA PMGSYLVRES  60
RDLGGLEEVF HAYGVRYYTA TKISELGFTA HTLLDMKDEE LDEMMNSLSH IFRWELLVGE  120
RYGIKAAVRA ERRRIDEEES RRRYLLSNDN ANTLDALSQE GLSEEPVQQE NEAAGSGGGG  180
GAWELAVIGR CGGVKAKHGV QRRIKKGRIE SSSHAHHGGD DNESEDDPDN GGGAERQREH  240
PFIVTEPGEV ARGKKNGLDY LFHLYEQCRE FLVQVQNIAK EKGEKCPTKV TNQVFRFAKK  300
AGASYINKPK MRHYVHCYAL HCLDEEGSNA LRRAYKERGE NVGAWRQACY KPLVTIAARQ  360
GWDIDAIFNS HPRLSIWYVP TKLRQLCHAE RSAAVAVATG STTVGGGNDA GGVGHMLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-155LFY family protein