PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013634.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 329aa MW: 37217.2 Da PI: 7.8185

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013634.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	107.5	9.2e-34	97	184	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS..........EEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr..........fhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dl +ak+yhrrhk+C hsk+p v+v+g+e+rfCqqCsr h+lsefD++krsCrrrL+ hn+rrr++q+ Cse_sc013634.1_g020.1 97 RCQVEGCNLDLVSAKDYHRRHKICADHSKSPIVVVAGMERRFCQQCSRqvlvyiskrlLHDLSEFDDRKRSCRRRLSAHNARRRRPQS 184 6********************************************977776666667************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEWNWDNEVP KSLEVSSHEN SEYLGGEDMQ RSFSNDIIEE GSVISGEALF GLKLGQGQET 60 YNQDKLRKSS FPLVPTSLCS PAVKKSRAVY QSSHSPRCQV EGCNLDLVSA KDYHRRHKIC 120 ADHSKSPIVV VAGMERRFCQ QCSRQVLVYI SKRLLHDLSE FDDRKRSCRR RLSAHNARRR 180 RPQSEDKFSS THRRPHMGFF VNEVSTSTPS PNSTPQSSSN FKREDVDMIS SGALSDISSS 240 FHGVTPRLAN HDGLDANSNS ICKMEVRHSF SLQATSSWGF NSRDEPSSFD QFINGHNTAS 300 LTQHGTPLEM QHTRNTQIPP HDFDYFCSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	181	RKRSCRRRLSAHNARRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-30	SBP family protein