PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013776.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 287aa    MW: 33303.6 Da    PI: 7.0613
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013776.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.42.4e-5291331128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelv++yL++k++++++++  +i+e+d+yk++Pw+Lp ++  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg 
  Cse_sc013776.1_g040.1   9 LPPGFRFHPTDEELVMHYLCRKCASQTISV-PIIAEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGA 95 
                            79****************************.88***************6666689********************************* PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk++ +   + vg+kk Lvfy g+ap+g+kt+W+mheyrl
  Cse_sc013776.1_g040.1  96 DKPIGK--PKPVGIKKALVFYAGKAPRGVKTNWIMHEYRL 133
                            ****98..789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSSCENLELP PGFRFHPTDE ELVMHYLCRK CASQTISVPI IAEIDLYKFD PWQLPDMALY  60
GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKPIG KPKPVGIKKA LVFYAGKAPR  120
GVKTNWIMHE YRLANVDRSA GKRNNNLRLD DWVLCRIYNK KGTLEKHYVD NSSQENQISE  180
MEVETKPKIT GYTPKPPPLH QPSSVPHHVM NDVFHFDTSE SVPTLHTDSS PEHEREVQSD  240
PKKNEFQFNY IDPFPDDAFT PQSQYYNDYQ LSPLQDMFMY TPKPFQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-114NAC family protein