PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013874.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 257aa    MW: 27756.8 Da    PI: 5.0463
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013874.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.2e-11139186455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Cse_sc013874.1_g030.1 139 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 186
                            8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDPPIINESS FSTANPSSYS LTEIWPFNEG GLGLKIGDSG ESSVTEQSGN GGRKMRDVNS  60
EDETSLLVST SSANDLSNLN GKRMKVSVSK DELGGLKVDG EGSSGSGSKA AAAEQSSKQS  120
EPPKDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD LVPGCNKVIG KALVLDEIIN  180
YIQSLQHQVE FLSMKLEAVT TRMNSPIEGF PTKEVSLGPP FDAAGLLFGS QAARDYGQES  240
QSEWLHMQLG SSYERAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-73bHLH family protein