PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013916.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 217aa    MW: 24268.2 Da    PI: 5.9082
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013916.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.9e-0986128348
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                             WT +Ed ll+++v+++   tW+ Ia+++  gR +  c + w kyl
  Cse_sc013916.1_g040.1  86 VWTNDEDNLLIELVNKYN--TWREIAEEIL-GRADVVCCHCWVKYL 128
                            6****************7..7********9.*******99999986 PP
2Myb_DNA-binding45.32e-14134180148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            +g+WT+eEd+ +v+ ++  G+ tW++Ia+ ++ gR+  qc +rw ++l
  Cse_sc013916.1_g040.1 134 KGPWTKEEDDHIVKNFEANGKMTWSKIANDLP-GRSSIQCEERWDNHL 180
                            79******************************.***********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MTLKHKMSAP VDVDVVVGKA PNHDDIKVME GNVGMKSEPH SVELKKEAGS TPSSVSCCIF  60
SSCDGNTLRS HRDRGNIART RSPSVVWTND EDNLLIELVN KYNTWREIAE EILGRADVVC  120
CHCWVKYLNP EINKGPWTKE EDDHIVKNFE ANGKMTWSKI ANDLPGRSSI QCEERWDNHL  180
DPAIKRETGS KEEESTLEMS TFPKSVGTGI QGTGNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.19e-32MYB family protein