PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013918.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 336aa    MW: 39141.5 Da    PI: 6.1473
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013918.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.72.6e-5471361129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 
                            +ppGfrFhPtdeelv++yL+kk++++ +el +vi++vd+yk+ePwdL++  ++ + e+++wyfFs++dkky+tg+r+nrat++g+Wka
  Cse_sc013918.1_g020.1   7 VPPGFRFHPTDEELVDYYLRKKINSRAIEL-DVIRDVDLYKIEPWDLQElcRLGTeEQNDWYFFSHKDKKYPTGSRTNRATAAGFWKA 93 
                            69****************************.9***************954544442566***************************** PP

                    NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                            tg+dk+++s k+ lvg++ktLv+ykgrap+g k+dW+mheyrle
  Cse_sc013918.1_g020.1  94 TGRDKAIYS-KHDLVGMRKTLVYYKGRAPNGLKSDWIMHEYRLE 136
                            *********.8899****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MNTFSHVPPG FRFHPTDEEL VDYYLRKKIN SRAIELDVIR DVDLYKIEPW DLQELCRLGT  60
EEQNDWYFFS HKDKKYPTGS RTNRATAAGF WKATGRDKAI YSKHDLVGMR KTLVYYKGRA  120
PNGLKSDWIM HEYRLETDEN ATTTQASQVF KKRLPIVRRA SDHELMWYDD QQVSFMPEID  180
SPTQNNNVRS NLGNSPYQYP YGSCKKEQDH LQNYQIIPGH HLQLPLLESP KLLPTCNSSM  240
PSYGLDINQG SIHMQPSLPI TQEHNNIQSQ HQGQNYNDQV TDWRVFDKFV ASQLLNQDNV  300
SNNENHEQSY PTEEEHTVLP EEASNSISGC QIDLWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-111NAC family protein