PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014035.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 841aa MW: 95489.9 Da PI: 8.8878

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014035.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.7	4.3e-09	20	98	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+ +GF ++k+++k++ ng++ + +++C k g e + + +r++++++ +C +l+ k + + +w + HnHel Cse_sc014035.1_g020.1 20 ASGLGFVIVKKRTKSE--NGQMFEINYKCAKGGIYEYHGSG----KRKTKTKKSNCPFRLVAKYRPtQYNWILRVKCDSHNHELL 98 77899999987666..999***********98877....899999**********9788888888889***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 841 aa Download sequence
MYFQAFRSHE ELTEWVQNIA SGLGFVIVKK RTKSENGQMF EINYKCAKGG IYEYHGSGKR 60 KTKTKKSNCP FRLVAKYRPT QYNWILRVKC DSHNHELLES LHGVPYAMRL KDDELSLVKE 120 LSEYSVPPRN ILSTIKGRNP DNVSSVRTIY NALDKFRRAR VGDRTQIQVL YSHLVDSGYA 180 YYPRVNEHNE LEELFFVHPT SNALWRTFPE IMLMDSMYNT TMFKLPLLEI VGVTPTNKTF 240 SMAYSFIHGN RIATHHHSHV TILAVTTESS PVESQLISSF TENNINIIKI PLPEMSDLLR 300 PEDTVFTHLI VMMREARQGI RSAISSMKRR PDVIIADMFS TESLPIADEF GVQKYLFTPI 360 LARTVGLVTY LPILDKEVSG QYVDRKDPLN IPGCVPIQCE NVPDPMLDRN SREYDEYVRM 420 GNDFATLPDG ILINTWRDME PRFLNALKYN ETFTSLLKVP IYDIGPLTRD VDPAVSKESK 480 VIKWLDMQPI ESVLFVSFGS GGTLSLEQIT ELAWGLELSQ QRFVWVVRPP PASSTADGAY 540 FVAGGGGGGP DVSGPSYFLP KGFLARNEKL GLVIPLWAPQ VEILNHVSIG GFLSHCGVNS 600 VCESIVAGVP MIAWPLHAEQ RLNASTLVQE VKVAMRPEVL PTKKVVGRVE IEKMVRSLMK 660 GEEGKLMRDK VKALRESANK ALANGSSYNS MCEFIKCCEM KMKSVQVQGR YSVEEDEDPK 720 QNMKIIMDTL LLGRKKKEGC CKIIRSRREM SYAYGGNKTW FIGLIMVTKD AARREAKRRS 780 GKKQLDCRKV ETHKACRVWT WSTQDGAVRN TRTSNGQVWK GYRFMDNSYE DGQEQSEVYD 840 S

Sequence ? help Back to Top

Protein Sequence Length: 841 aa Download sequence

MYFQAFRSHE ELTEWVQNIA SGLGFVIVKK RTKSENGQMF EINYKCAKGG IYEYHGSGKR  60
KTKTKKSNCP FRLVAKYRPT QYNWILRVKC DSHNHELLES LHGVPYAMRL KDDELSLVKE  120
LSEYSVPPRN ILSTIKGRNP DNVSSVRTIY NALDKFRRAR VGDRTQIQVL YSHLVDSGYA  180
YYPRVNEHNE LEELFFVHPT SNALWRTFPE IMLMDSMYNT TMFKLPLLEI VGVTPTNKTF  240
SMAYSFIHGN RIATHHHSHV TILAVTTESS PVESQLISSF TENNINIIKI PLPEMSDLLR  300
PEDTVFTHLI VMMREARQGI RSAISSMKRR PDVIIADMFS TESLPIADEF GVQKYLFTPI  360
LARTVGLVTY LPILDKEVSG QYVDRKDPLN IPGCVPIQCE NVPDPMLDRN SREYDEYVRM  420
GNDFATLPDG ILINTWRDME PRFLNALKYN ETFTSLLKVP IYDIGPLTRD VDPAVSKESK  480
VIKWLDMQPI ESVLFVSFGS GGTLSLEQIT ELAWGLELSQ QRFVWVVRPP PASSTADGAY  540
FVAGGGGGGP DVSGPSYFLP KGFLARNEKL GLVIPLWAPQ VEILNHVSIG GFLSHCGVNS  600
VCESIVAGVP MIAWPLHAEQ RLNASTLVQE VKVAMRPEVL PTKKVVGRVE IEKMVRSLMK  660
GEEGKLMRDK VKALRESANK ALANGSSYNS MCEFIKCCEM KMKSVQVQGR YSVEEDEDPK  720
QNMKIIMDTL LLGRKKKEGC CKIIRSRREM SYAYGGNKTW FIGLIMVTKD AARREAKRRS  780
GKKQLDCRKV ETHKACRVWT WSTQDGAVRN TRTSNGQVWK GYRFMDNSYE DGQEQSEVYD  840
S