PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014091.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 141aa    MW: 16508.4 Da    PI: 9.5689
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014091.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.54.8e-152381551
                           HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                 SRF-TF 15 kRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                           kR+ngi+KKA+ + vLCda+v+ +i+ s+ k+yey+s
  Cse_sc014091.1_g040.1  2 KRKNGIIKKAKDIIVLCDANVSFVIYVSSSKMYEYCS 38
                           9**********************************96 PP
2K-box13.62.8e-065077128
                  K-box  1 yqkssgksleeakaeslqqelakLkkei 28
                           yq  sg++l++ak+e+l++e++++kke+
  Cse_sc014091.1_g040.1 50 YQIISGSKLWDAKHENLKNEIDRIKKEN 77
                           56678999******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MKRKNGIIKK AKDIIVLCDA NVSFVIYVSS SKMYEYCSPK TNLIDMLDRY QIISGSKLWD  60
AKHENLKNEI DRIKKENIRI GILTTMPKIM RKHEQVLKEE NKHLMYLVQQ SEMAAAMGDY  120
QAHEPFALHV QSMQPNLHER M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.16e-39MIKC_MADS family protein